BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031C07SP1|AL429364
(937 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1013 1822 0.0
>3x_Contig1013
Length = 5070
Score = 1822 bits (917), Expect = 0.0
Identities = 930/935 (99%), Gaps = 1/935 (0%)
Strand = Plus / Minus
Query: 1 taacgatggttcatgacaaggaacatgttttgatccttgatgttcctcttgttcatcgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2426 taacgatggttcatgacaaggaacatgttttgatccttgatgttcctcttgttcatcgtc 2367
Query: 61 agamatctcagattcttcatcgtaaaacttggcatccatgaaagatcttctcttagcgct 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2366 agaaatctcagattcttcatcgtaaaacttggcatccatgaaagatcttctcttagcgct 2307
Query: 121 ggccaatttaatcaaatctgattcggttaatgtgccgacttgtaagtnacttgcaataga 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2306 ggccaatttaatcaaatctgattcggttaatgtgccgacttgtaagttacttgcaataga 2247
Query: 181 atgaacttccaaaccggtttcttccctgaacgttggaatgaccactttttgggaaccgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2246 atgaacttccaaaccggtttcttccctgaacgttggaatgaccactttttgggaaccgct 2187
Query: 241 atttggttctaccagttcatttttgggggattgttgagtggtagcactgaatatcttaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2186 atttggttctaccagttcatttttgggggattgttgagtggtagcactgaatatcttaga 2127
Query: 301 tccgttctttagacttcttcctccagatgtcaataatccaaaatcgtctctatcctgaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2126 tccgttctttagacttcttcctccagatgtcaataatccaaaatcgtctctatcctgaat 2067
Query: 361 caattgcaccgaagg-cactgcggaggtgttgaacaatctttacctgagaccgtnggtag 419
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2066 caattgcaccgaagggcactgcggaggtgttgaacaatctttacctgagaccgttggtag 2007
Query: 420 actctctaaaccgtataagagatctggcaaagcagaaggattaccatattcgtaactact 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2006 actctctaaaccgtataagagatctggcaaagcagaaggattaccatattcgtaactact 1947
Query: 480 ggatttctgtgtcgctgaacccgagttgcaataagaaatagcttgatttgccaatgctct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1946 ggatttctgtgtcgctgaacccgagttgcaataagaaatagcttgatttgccaatgctct 1887
Query: 540 gtatactccactagatttggaatggttgtccggagataactgaccttcgcgctgaccctt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1886 gtatactccactagatttggaatggttgtccggagataactgaccttcgcgctgaccctt 1827
Query: 600 ttctgtcgctgtcgctatcttcgtttttagaacatcagaagatgaagggatcacaatgct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1826 ttctgtcgctgtcgctatcttcgtttttagaacatcagaagatgaagggatcacaatgct 1767
Query: 660 aggttctgtatcaacaggactgaatgtaatgttaaagtcctgaatatttttcatccaatt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1766 aggttctgtatcaacaggactgaatgtaatgttaaagtcctgaatatttttcatccaatt 1707
Query: 720 gttggcaaatctggggtccatagcctcaaatggtgccattttcctcacagcatcgtccct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1706 gttggcaaatctggggtccatagcctcaaatggtgccattttcctcacagcatcgtccct 1647
Query: 780 tgttacaggcggtcttttatcgacaacagcttcgttgaataaacgttctaattgttgacc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1646 tgttacaggcggtcttttatcgacaacagcttcgttgaataaacgttctaattgttgacc 1587
Query: 840 gtcagtcttatacttgttgtaacacgagtwgttgcccactgactgatcatcattgttagt 899
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1586 gtcagtcttatacttgttgtaacacgagtagttgcccactgactgatcatcattgttagt 1527
Query: 900 tgaatagcaatgatctggttctccttgatccatcc 934
|||||||||||||||||||||||||||||||||||
Sbjct: 1526 tgaatagcaatgatctggttctccttgatccatcc 1492
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6275
Number of Sequences: 1807
Number of extensions: 6275
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 937
length of database: 10,358,551
effective HSP length: 16
effective length of query: 921
effective length of database: 10,329,639
effective search space: 9513597519
effective search space used: 9513597519
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)